Sequencing Citations

Sanger Sequencing Citations

Monecke. S., Coombs. G., Pearson. J., Hotzel. H., Slickers. P., Ehricht. R. (2015). A CC12 MRSA strain, West Australian MRSA-59, harbors a novel pseudo-SCCmec element. Antimicrob. Agents Chemother. doi: 10.1128/AAC.01745-15.      

Holgate. R., Weldon. R., Jones. T., Baker. M. (2015). Characterisation of a Novel Anti-CD52 Antibody with Improved Efficacy and Reduced Immunogenicity. PLoS ONE. 10(9): e0138123.

Budd. K., McCoy. F., Monecke. S., Cormican. P., Mitchell. J., Keane. O. (2015). Extensive Genomic Diversity among Bovine-Adapted Staphylococcus aureus: Evidence for a Genomic Rearrangement within CC97. PLoS ONE. 10(8):e0134592.

McManus. B., Coleman. D., Deasy. E., Brennan. G., O' Connell. B., Monecke. S., Ehricht. R., Leggett. B., Leonard. N., Shore. A. (2015). Comparative Genotypes, Staphylococcal Cassette Chromosome mec (SCCmec) Genes and Antimicrobial Resistance amongst Staphylococcus epidermidis and Staphylococcus haemolyticus Isolates from Infections in Humans and Companion Animals. PLoS ONE. 10(9):e0138079.

Jungnick. S., Margos. G., Rieger. M., Dzaferovic. E., Bent. S., Overzier. E., Silaghi. C., Walder. G., Wex. F., Koloczek. J., Sing. A., Fingerle. V. (2015). Borrelia burgdorferi sensu stricto and Borrelia afzelii: Population structure and differential pathogenicity. Int. J. Med. Microbiol. 305(7):673-81.      

Ideozu. E., Whiteoak. A., Tomlinson. A., Robertson. A., Delahay. R., Hide. G. (2015). High prevalence of trypanosomes in European badgers detected using ITS-PCR. Parasit Vectors. 8(1):480.

Desjardins. S., Leslie. A., Stace. C., Schwarzacher. T. (2015). Intergeneric hybridisation between Berula erecta and Helosciadium nodiflorum (Apiaceae). Taxon. 64(11):784-794.

Clark. M., Thorne. M., Burns. G., Peck. L. (2015). Age-related thermal response: the cellular resilience of juveniles. Cell Stress Chaperones. 1-13.

Behnke. J. Stewart. A., Bajer. A., Grzybek. M. (2015). Bank voles (Myodes glareolus) and house mice (Mus musculus musculus; M. m. domesticus) in Europe are each parasitized by their own distinct species of Aspiculuris (Nematoda, Oxyurida). Parasitology. DOI: 10.1017/S0031182015000864.

Yamchi. J., Haeili. M., Feyisa. S., Kazemian. H. (2015).  Evaluation of efflux pump gene expression among drug susceptible and drug resistant strains of Mycobacterium tuberculosis from Iran. INFECTION, GENETICS AND EVOLUTION: JOURNAL OF MOLECULAR EPIDEMIOLOGY AND EVOLUTIONARYGENETICS IN INFECTIOUS DISEASES. doi:10.1016/j.meegid.2015.08.036.

Jajesniak. P., Wong. T. (2015). QuickStep-Cloning: a sequence-independent, ligation-free method for rapid construction of recombinant plasmids. J Biol Eng. 9:(15).

Song. H., Dicks. E., Ramus. S., Tyrer. J., Intermaggio. M., Hayward. J., Edlund. C. et al. (2015). Contribution of Germline Mutations in the RAD51B, RAD51C, and RAD51D Genes to Ovarian Cancer in the Population. J. Clin. Oncol. doi: 10.1200/JCO.2015.61.2408.

Amilon. K., Letley. D., Winter. J. (2015). Expression of the H. pylori virulence factor vacuolating cytotoxin A (vacA) is influenced by a potential stem‐loop structure in the 5'untranslated region of the transcript. Molecular Microbiology. doi: 10.1111/mmi.13160.  

Short. S., Peterkin. T., Guille. M., Patient. R., Sharpe. C. (2015). Short linear motif acquisition, exon formation and alternative splicing determine a pathway to diversity for NCoR-family co-repressors. Open Biol. 5(8).   

Taylor-Wells. J., Brooke. B., Bermudez. I., Jones. A. (2015). The neonicotinoid imidacloprid, and the pyrethroid deltamethrin, are antagonists of the insect Rdl GABA receptor. J. Neurochem. doi: 10.1111/jnc.13290.      

Manley. R., Harrup. L., Veronesi. E., Stubbins. F., Stoner. J., Gubbins. S., Wilson. A., Batten. C. (2015). Testing of UK Populations of Culex pipiens L. for Schmallenberg Virus Vector Competence and Their Colonization. PLoS ONE. 10(8):e0134453.

Ganapathy. K., Ball. C., Forrester. A. (2015). Genotypes of infectious bronchitis viruses circulating in the Middle East between 2009 and 2014. Virus Res. 210:198-204

Ouoba. L., Nielsen. D., Anyogu. A., Kando. C., Diawara. B., Jespersen. L., Sutherland. J. (2015). Hanseniaspora jakobsenii sp. nov., a novel yeast isolated from Bandji, a traditional palm wine of Borassus akeassii from Burkina Faso. Int. J. Syst. Evol. Microbiol. doi: 10.1099/ijsem.0.000461.   

Guler. Y., Short. S., Green Etxabe. A., Sherhod. C., Kille. P., Ford. A. (2015). Impacts of a newly identified behaviour-altering trematode on its host amphipod: from the level of gene expression to population. Parasitology. 18:1-12.     

Boufana. B., Lett. W., Lahmar. S., Griffiths. A. (2015). Canine echinococcosis: genetic diversity of Echinococcus granulosus sensu stricto (ss) from definitive hosts. Journal of Helminthology. 89(6):689-698.

Bennett. L., Dunham. S., Yon. L. (2015). Longitudinal study of Asian elephants, Elephas maximus, indicates intermittent shedding of elephant endotheliotropic herpesvirus 1 during pregnancy. Vet Rec Open. 2(1):e00008.

Kaiser. V., Svinti. V., Prendergast. J., Chau. Y., Campbell. A., Patarcic. I. et al. (2015). Homozygous loss-of-function variants in European cosmopolitan and isolate populations. Hum. Mol. Genet. 24(19):5464-74.

Allan. A., Sanderson. N., Gubbins. S., Ellis. S., Hammond. J. (2015). Cattle NK Cell Heterogeneity and the Influence of MHC Class I. J. Immunol.           195(5):2199-206.

McLean. A. and Godfray. H. (2015). Evidence for specificity in symbiont-conferred protection against parasitoids. Proc. Biol. Sci. 282:1811.

Hung. M. Humbert. M., Laver. J. Phillips. R., Heckels. J. Christodoulides. M. (2015). A putative amino acid ABC transporter substrate-binding protein, NMB1612, from Neisseria meningitidis, induces murine bactericidal antibodies against meningococci expressing heterologous NMB1612 proteins. Vaccine. 33(36):4486-94.

Forster. L. Ardakani. R., Qadah. T., Finlayson. J., Ghassemifar. R. (2015). The Effect of Nonsense Mediated Decay on Transcriptional Activity Within the Novel β-Thalassemia Mutation HBB: c.129delT. Hemoglobin. 39(5):334-9.

Licandro. P., Blackett. M., Fischer. A. (2015). Biogeography of jellyfish in the North Atlantic, by traditional and genomic methods. Earth Syst. Sci. 7:     173–191.

Aplikioti. M., Louizidou. P., Mystikou. A. (2015). Further expansion of the alien seaweed Caulerpa taxifolia var. distichophylla(Sonder) Verlaque, Huisman & Procacini (Ulvophyceae, Bryopsidales) in the Eastern Mediterranean Sea. Aquatic Invasions.10.  

Chang. T. Hsieh. F. Zebisch. M., Harlos. K., Elegheert. J., Jones. E. (2015). Structure and functional properties of Norrin mimic Wnt for signalling with Frizzled4, Lrp5/6, and proteoglycan. Elife. DOI: 10.7554/eLife.06554.  

Greene. N., Crow. A. Hughes., C. Koronakis. V. (2015). Structure of a bacterial toxin-activating acyltransferase. Proc. Natl. Acad. Sci. U.S.A. 112(23):E3058-66.

Shum. P., Pampoulie. C., Kristinsson. K., Mariani. S. (2015). Three-dimensional post-glacial expansion and diversification of an exploited oceanic fish.   Mol. Ecol. 24(14):3652-3667.

Zheng. L., McMullen. M., Bauer. E., Schön. C., Gierl. A., Frey. M. (2015). Prolonged expression of the BX1 signature enzyme is associated with a recombination hotspot in the benzoxazinoid gene cluster in Zea mays. J. Exp. Bot. 66(13):3917-30.

Aloraifi. F., McDevitt. T., Martiniano. R., McGreevy. J., McLaughlin. R., Egan. C., Cody. N., Meany. M., Kenny. E. et al (2015). Detection of novel germline mutations for breast cancer in non-BRCA1/2 families. FEBS J. 282(17):3424-37.      

Hoover. C., Lindsay. T., Goddard. J. (2015). Seeing double: pseudocryptic diversity in the Doriopsilla albopunctata‐Doriopsilla gemela species complex of the north‐eastern Pacific. Zoologica Scripta. 44(6):612-631.

Juhas. M., Ajioka. J. (2015). Flagellar region 3b supports strong expression of integrated DNA and the highest chromosomal integration efficiency of the Escherichia coli flagellar regions. Microb Biotechnol. 8(4):726-38.

Aplikioti. M., Louizidou. P., Mystikou. A., Marcou. M. (2015). Further expansion of the alien seaweed Caulerpa taxifolia var. distichophylla (Sonder) Verlaque, Huisman & Procacini (Ulvophyceae, Bryopsidales) in the Eastern Mediterranean Sea. Aquatic Invasions. 10.   

Threlfall. A., Boag. A. Soutter. F. (2015). Analysis of DLA-DQB1 and polymorphisms in CTLA4 in Cocker spaniels affected with immune-mediated haemolytic anaemia. Canine Genetics and Epidemiology. 2(8).

Menzie. S., Gil-Velasco. M., Collinson. J. (2015). First genetically confirmed Eastern Subalpine Warbler Sylvia cantillans for Sweden. ORNIS SVECICA. 25:40-44.

Taubert. M., Grob. C., Howat. A., Burns. O., Dixon. J., Chen. Y., Murrell. J. (2015). XoxF encoding an alternative methanol dehydrogenase is widespread in coastal marine environments. Environ. Microbiol. DOI: 10.1111/1462-2920.12896.

Hughes. L., Carton. R., Minguzzi. S., McEntee. G., Deinum. E., O'Connell. M., Parle-McDermott. A. (2015). An active second dihydrofolate reductase enzyme is not a feature of rat and mouse, but they do have activity in their mitochondria. FEBS Lett. 589(15):1855-1862.

Parra. J., Oliveras. L., Rodriguez. A., Riffo. F. (2015). Riesgo de contaminación por Cronobacter Sakazakii en leches en polvo para la nutrición de lactantes. Revista chilena de nutrición. 42:1.  

Juhas. M., Ajioka. J. (2015). Identification and Validation of Novel Chromosomal Integration and Expression Loci in Escherichia coli Flagellar Region 1. PLoS ONE. 10(3):e0123007.

Klein. W., Westendorf. C., Schmidt. A., Conill-Cortés. M., Rutz. C., Blohs. M., Beyermann. M., Protze. J., Krause. G., Krause. E., Schülein. R. (2015). Defining a conformational consensus motif in cotransin-sensitive signal sequences: a proteomic and site-directed mutagenesis study. PLoS ONE. 10(3):  e0120886.

Zhang. Y., Grosse-Honebrink. A., Minton. N. (2015). A universal mariner transposon system for forward genetic studies in the genus clostridium. PLoS ONE. 10(4):e0122411.

Hamad. I., Fei. Y., Kalea. A., Yin. D., Smith. A., Palmen. J., Humphries. S., Talmud. P., Walker. A. (2015). Demonstration of the Presence of the Deleted MIR122 Gene in HepG2 Cells. PLoS ONE.10(3):e0122471.

Scanlan. P., Stensvold. C., Cotter. P. (2015). Development and application of Blastocystis subtype-specific PCR reveals that mixed subtype infections are common in a healthy human population. Appl. Environ. Microbiol. doi:10.1128/AEM.00520-15.      

Niehr. F., Weichert. W., Stenzinger. A., Budach. V., Tinhofer. I. (2015). CCI-779 (Temsirolimus) exhibits increased anti-tumor activity in low EGFR expressing HNSCC cell lines and is effective in cells with acquired resistance to cisplatin or cetuximab. J Transl Med.13(1):106.

Wetten. A., Campbell. C., Allainguillaume. J. (2015). High resolution melt and morphological analyses of mealybugs (Hemiptera: Pseudococcidae) from cacao: tools for the control of Cacao Swollen Shoot Virus spread. Pest Manag. Sci. doi:10.1002/ps.4017.  

Al-Deeb. MA., Muzaffar. S., Abu-Zeid. Y., Enan. M. (2015). First record of a spotted fever group Rickettsia sp. and Theileria annulata in Hyalomma dromedarii (Acari: Ixodidae) ticks in the United Arab Emirates. Florida Entomologist.98(1):135-139.

Ott. S., Dziadulewicz. N. (2015). Iron is a specific cofactor for distinct oxidation-and aggregation-dependent Aβ toxicity mechanisms. Disease Models & Mechanisms. doi: 10.1242/dmm.019042.       

Özdemir. Z., Cagirgan. M. (2015). Identification and characterization of a phytoplasma disease of jute (Corchorus olitorius L.) from south-western Turkey. Crop Protection. 74:1–8.

Port. F., Muschalik. N., Bullock. S. (2015). CRISPR with independent transgenes is a safe and robust alternative to autonomous gene drives in basic research. bioRxiv. doi:   

Glass. D., Scott. D., Donoher. D., Overall. A. (2015). The origins of the County Kildare Dormouse. Biology and Environment: Proceedings of the Royal Irish Academy. 115B:1.

van Knippenberg. I., Elliott. R. (2015). Flexibility of bunyavirus genomes: creation of an orthobunyavirus with an ambisense S segment. J. Virol. 89(18):9477-9484.  

Liu. S., Charlesworth. T., Bason. J., Montgomery. M., Harbour. M., Fearnley. I., Walker. J. (2015). The purification and characterization of ATP synthase complexes from the mitochondria of four fungal species. Biochem. J. 468(1):167-175.   

Martın-Garcıa. J., Solla. A., Corcobado. T., Siasou. E. (2014). Influence of temperature on germination of Quercus ilex in Phytophthora cinnamomi, P. gonapodyides, P. quercina and P. psychrophila infested soils. For. Path. doi: 10.1111/efp.12159.    

Alvarez-Ordóñez. A., Leong. D., Morgan. C. (2015). Occurrence, Persistence, and Virulence Potential of Listeria ivanovii in Foods and Food Processing Environments in the Republic of Ireland. BioMed Research International.     

Chrostek. E., Teixeira. L. (2015). Mutualism breakdown by amplification of wolbachia genes. PLoS Biol.13(2):e1002065.

Brady. J., Claridge. J., Smith. P., Schnell. J. (2015). A conserved amphipathic helix is required for membrane tubule formation by Yop1p. Proc. Natl.Acad. Sci. U.S.A.112(7):E639-48.

Crichton. P., Lee. Y., Ruprecht. J., Cerson. E., Thangaratnarajah. C., King. M., Kunji. ER. (2015). Trends in thermostability provide information on the nature of substrate, inhibitor and lipid interactions with mitochondrial carriers. J. Biol. Chem. 112:6973-6978.

Munday. J., Tagoe. D., Eze., A., Krezdorn. J., Rojas-López. K., Alkhaldi. A., McDonald. F., Still. J., Alzahrani. K., Settimo. L., De Koning. H. (2015).    Functional analysis of drug resistance-associated mutations in the Trypanosoma brucei Adenosine Transporter 1 (TbAT1) and the proposal of a structural model for the protein. Mol. Microbiol. 96(4):887–900.

O'Halloran. D., Wynne. K., Geoghegan. J. (2015). Protein A is released into the Staphylococcus aureus culture supernatant with an unprocessed sorting signal. Infect. Immun. doi:10.1128/IAI.03122-14.       

Schabetsberger. R., Økland. F., Kalfatak. D. (2015). Genetic and migratory evidence for sympatric spawning of tropical pacific eels from Vanuatu. Mar Ecol Prog Ser. 521:171-187.

Folwell. B., McGenity. T., Price. A., Johnson. R. (2015). Exploring the capacity for anaerobic biodegradation of polycyclic aromatic hydrocarbons and naphthenic acids by microbes from oil-sands-process-affected waters. International Biodeterioration & Biodegradation. doi :10.1016/j.ibiod. 2014.12. 016.        

Thorasin. T., Hoyles. L., McCartney. A. (2014). Dynamics and diversity of the 'Atopobium cluster' in the human faecal microbiota, and phenotypic characterization of 'Atopobium cluster' isolates. Microbiology (Reading, Engl.).161(3):565-579.

Al-Mubarak. F., Daly. J., Christie. D., Fountain. D., Dunham. S. (2015). Identification of morphological differences between avian influenza A viruses grown in chicken and duck cells. Virus Res.199:9-19.

Soutter. F., Kennedy. L., Ollier. W., Solano-Gallego. L., Catchpole. B. (2015). Restricted dog leucocyte antigen (DLA) class II haplotypes and genotypes in Beagles. Vet. J. 203:345–347.

Al-Shekaili. T., Baylis. M., Ganapathy. K. (2014). Molecular detection of infectious bronchitis and avian metapneumoviruses in Oman backyard poultry. Res. Vet. Sci. 99:46-52.

King. K., Harris. A., Webber. J. (2015). In planta detection used to define the distribution of the European lineages of Phytophthora ramorum on larch (Larix) in the UK. Plant Pathology. 64(5):1168-1175.

Pratt. N., Ciott. B., Morgan. E., Taylor. P., Stahl. H. (2014). No evidence for impacts to the molecular ecophysiology of ion or CO2 regulation in tissues of selected surface-dwelling bivalves in the vicinity of a sub-seabed CO2 release. International Journal of Greenhouse Gas Control.

Celma. C., Roy. P. (2014). Pathogenicity study in sheep usingreverse-genetics-based reassortant bluetongue viruses. Veterinary Microbiology.