Linkout Tools
I.M.A.G.E. Clone IDs
Several utilities are provide to assist with I.M.A.G.E. clones:
I.M.A.G.E. clone information
This tool will give you access to a large range of information on a
particular I.M.A.G.E. clone. You will have access to the vector,
insertion sites, species, organ used to build the library,
sequence, GeneBank accession number and more.
I.M.A.G.E.
Translate
Use this tool to match the I.M.A.G.E. ID (e.g. 1226314) to the
I.M.A.G.E. clone coordinate (e.g. 3083-n11) on our agar slope
labels.
GPCR Finder
Use this tool to match the I.M.A.G.E. ID (e.g. 6519150) to the
GPCR clone coordinate (e.g. IRBF1-A07) on our agar slope labels and
also the Gene name (eg G-protein alpha z).
Plate Conversion
Utility
This tool converts the clone name back to the I.M.A.G.E. ID
MGC Finder
- is only available from Source BioScience LifeSciences and enables
you to obtain all the current information on an MGC clone - IMAGE
ID, MGC_ID, species, vector, rearray clone location, Genbank
Accession number, Unigene Cluster Number, GenBank definition line
and gene symbol. In addition, MGC Finder now has a plate query tool
that allows you to obtain all the above information for any MGC
plate.
RNAi Finder - Enter Gene ID or Source
BioScience LifeSciences Plate number to find the corresponding
nomenclatures for this clone
Human shRNAi Finder - To search for knockdown
shRNA candidates for your gene of interest, please input your gene
symbol
C.elegans Finder
Use this tool for finding the plate and well position (Source
BioScience LifeSciences ID) for any GenePair Name and vice versa
together with the primer sequences.
Cystic Fibrosis Finder
C.elegans Orfeome Finder
Use this tool to find the plate and well position (Source
BioScience LifeSciences ID) for any C. elegans Orfeome ID
and vice versa.
C. elegans FOS finder
This tool allows you to search for your gene or region of
interest.
C. elegans Promoterome finder
Use a gene ID to find your promoter of interest.
Other Utilities
Well Plate Conversion
You can convert 96-well plate coordinates to 384-well plate
coordinates and vice versa using this utility.
LLNL Chromosome 19 Finder
Allows you to correlate all the IDs for a given Chromosome 19
clone.
DGC Finder
Drosophila:
Flybase: Molecular biology and genetics of
Drosophila.
Flymine:
is an integrated database of genomic, expression and protein data
for Drosophila, Anopheles and C. elegans.
Mouse:
Mouse
Genome Informatics (MGI): provides integrated access to data on
the genetics, genomics, and biology of the laboratory mouse.
Human:
The GDB Human
Genome Database: Worldwide Database for the Annotation of the
Human Genome.
HGNC (HUGO gene nomenclature committee): the
approval of over 23,000 human gene symbols and names.
C.elegans:
Worm labs: Individual lab servers, Commercial
C. elegans labs, Vendor of products useful for C. elegans research,
Researcher profiles and Regional C. elegans servers.
"ACEprimer": a C. elegans primer design
program: Genome Sciences Centre, Vancouver, British Columbia,
Canada.
PhenoBank: genome-wide RNAi screening with
time-lapse video microscopy.
Wormbase:
The biology and genome of C. elegans.
Genomics:
GO:
Gene Ontology consortium database.
Ensembl:
Eukaryotic annotated genome information.
EMBL
Nucleotide sequence database: Publicly available nucleotide and
protein sequences.
GenBank: Publicly available nucleotide and
protein sequences.
DNA
databank of Japan: Publicly available nucleotide and protein
sequences.
KEGG: : Kyoto Encyclopaedia of Genes and
Genomes.
ENTREZ: : PubMed/Medline, Nucleotide and
Protein databases.
Plasmapper: a free plasmid drawing website.
Molecular Biology:
REBASE: a comprehensive database containing
information on restriction endonucleases.
Cell and Molecular Biology online: Methods and
Protocols.
Protein Science:
Expasy: :
Expert Protein Analysis System (Swiss-Prot and PROSITE).
Enzyme nomenclature:
RCSB PDB: : provides a variety of tools and
resources for studying the structures of biological macromolecules
and their relationships to sequence, function, and disease.
Other useful links:
Microbiology jump-station: Information and
resources on microbiology.
Open Reading Frame finder: a graphical analysis
tool that finds all open reading frames.
PubCrawler: is a free "alerting" service that
scans daily updates to the NCBI Medline (PubMed) and GenBank
databases.